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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015796928.1_cds_XP_016452310.1_4597
CDS Infomation

[gene=LOC107776844] [db_xref=GeneID:107776844] [protein=E3 ubiquitin-protein ligase RNF216-like isoform X6] [protein_id=XP_016452310.1] [location=join(71739..71803,72819..72930,73091..73205,73571..73691,75609..75720,75921..76035,79308..79932,80877..80949)] [gbkey=CDS]
Sequence

ATGGACTCTGCTGATTGGCGCACTCAACTTCTACCCGATTCTCGTCAAAGGATTGTCAAC
AACATAACCGAGACCTTAAAGAGGCATCTTTCTGTCACTAGGGAAGGAGGAGTTCAGGAG
CTCAAGAAAATTGCAGCGGGGTTTGAGGAAAAGATCTATACTGCTGCTACAAGTCAACAA
GATTATCTACGAAAAATATCTCTAAAGATGCTTACTATGGAGACAAAATCTCAAAATCCT
ATGACCAATTCGAGCAATGCTGCAAGTAGTGGTCAGAATGCCCATGACCCAGGAAATGCA
TATTTTGGGAGTGAAGGTACCGCCCCAGCTGGAGCTGCAGTCGGAGTTCTGGATGCCGCT
GATTGGCGGATTCAACTTCTACCTGATTCTCGTCAAAGCATTGTCAACAAGATAACCGAG
ACCTTAAAACGGCATCTTCCTGTCACTGGAGAAGAAGGAGTTCAGGAGCTCAAGAAAATT
GCAGTGAGGTTTGAGGAAAAGATCTATACTGCTGCTATAAGTCAGCCAGATTATCTACGA
AAAATATCTCTAAAGATGCTGACTATGGAGACAAAATCTCAACATCCTATGACCAATTCG
ACCAATGCTGCAAGTAGTGGTCAGAATGCCCTTGGTCCAGATTCCTGCCAGGAAAGGGAA
ATTACTCAAGGAAGCATGAAGAGAAAGAGAGAAAACTCGGGAGATAATGTTGAAGAGCAT
AATGATCAAATTCTACCAACATTTACATGTGAAATATGCACTGAAGTTGTTCCAATAACC
ATGAAATTCAACAATTTCCATAGTTGCAATCATTCTTTTTGCTCAAAATGCATAGAGAGG
CACGTCGAAGTGAAAATCCAACTAAGGATTGCTGATATACAGTGCCCGTATGTAGATTGT
GGGAAACTTTTGGACCCTCTAGTATGTAGAACGATGATTCCCTTATCGATTTTCGAGGAG
TGGTGTGACCTTCTCTGCAGGCAGGCTCATTTAGGATTCGAGAAATGTTACTGTCCTTAT
CAAGATTGTGGAGAAGTCATTGTTAAAGAGTGTGAAGATGTTGTTGGAAAATCGGAGTGT
CCTAACTGCAGAAGATTGATTTGCTTTCAGTGTGGGCTTCCATGGAATGTCTGTGAAGAA
AATGGATGTTCAAAGGTGAATGATACTTTGTTCAAAGAACTTGTGGAGCAAAAGCAATGG
ACTAAATGTCCTAGCTGTAATATGTATGTCGAACGAATTGCAGGCTGCAATCATATGCAA
TGCAGATGCAATTTCTGTTTCTGCTACAAATGCGGGAAAAGCCCTACTGCTCAGAGGCGC
TGGTGCAGGTGCAAATAA

Peptide Sequence

PEP ID

XP_016452310.1
PEP Infomation

PREDICTED: E3 ubiquitin-protein ligase RNF216-like isoform X6 [Nicotiana tabacum]
Sequence

MDSADWRTQLLPDSRQRIVNNITETLKRHLSVTREGGVQELKKIAAGFEEKIYTAATSQQ
DYLRKISLKMLTMETKSQNPMTNSSNAASSGQNAHDPGNAYFGSEGTAPAGAAVGVLDAA
DWRIQLLPDSRQSIVNKITETLKRHLPVTGEEGVQELKKIAVRFEEKIYTAAISQPDYLR
KISLKMLTMETKSQHPMTNSTNAASSGQNALGPDSCQEREITQGSMKRKRENSGDNVEEH
NDQILPTFTCEICTEVVPITMKFNNFHSCNHSFCSKCIERHVEVKIQLRIADIQCPYVDC
GKLLDPLVCRTMIPLSIFEEWCDLLCRQAHLGFEKCYCPYQDCGEVIVKECEDVVGKSEC
PNCRRLICFQCGLPWNVCEENGCSKVNDTLFKELVEQKQWTKCPSCNMYVERIAGCNHMQ
CRCNFCFCYKCGKSPTAQRRWCRCK

Transcript Sequence

Gene sequence data has not been registered.